Genome-wide analysis of brassinosteroid responsive small RNAs in ...

Genome-wide analysis of brassinosteroid responsive small RNAs in ...

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Genome-wide analysis of brassinosteroid responsive small RNAs in ...

9 Jul 2020 ... ... National University, Daejeon, 34134, Korea. [email protected]. ... miR398a-5p is down-regulated by BRs, its predicted targets were not ...

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22 Mar 2019 ... Genome-wide discovery of structured noncoding RNAs in bacteria ... No changes in the plot occurred outside of the area depicted. ... For agar-diffusion assays, cells grown in LB were spun down and washed with GMM to ...

Genome-wide analysis on the maize genome reveals weak ...

29 Apr 2020 ... The synonymous mutations in the maize genome are not strictly ... mutations have significantly higher DAF than the tAI-down mutations (Fig.

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28 Mar 2012 ... If at any point a rule is broken during a traversal and there is no valid alignment in its maintained history, the algorithm no longer continues down ...

Genome-Wide Analysis of Glycoside Hydrolase Family 1 β ...

3 Apr 2019 ... ... Yunnan University, Kunming 650091, China. [email protected]. ... and maize, but not in Brassica species, which are important vegetable crops. ... and the examination of knocked down Arabidopsis plants strongly ...

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13 Mar 2019 ... [email protected]. ... Of the 23,188 genes being analyzed, 47 (33 up-regulated and 14 down-regulated) were found to have differential ...

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Transcription from the U6 promoter does not necessarily start from the 1 (G) ... the transcription initiation of shR1005-GG and shR1005-GGG started at multiple ... likely to increase off-target effects caused by undesired small RNA products.

Microarray Expression Profile Analysis of Long Non-Coding RNAs in ...

15 Apr 2014 ... All the patients had not received preoperative chemoradiation after ... B, The number of up-regulated and down-regulated lncRNAs ... Fourth Military Medical University, Xi'an, Shan'xi (China) E-Mail [email protected].

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3 Jan 2019 ... Although the ability of DNA to engage in triplex structures with RNA is well established ... of DNA:RNA triplexes by RNA pull-down and sequencing of associated DNA. ... RNA from DNA-IP was not subjected to rDNA depletion. ... D.K.. ,. Roeder. R.G.. Separation and partial characterization of three functional ...

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16 Dec 2019 ... Previously reported HLA associations do not replicate in these samples. ... a Regional hitplot showing evidence for association (log10 BFavg, y axis) across a 2.5 ... correlated effects (all off-diagonal entries of Ρ set to 0.9) ... Tournamille, C., Colin, Y., Cartron, J. P. & Le Van Kim, C. Disruption of a GATA motif ...

(PDF) The EIL transcription factor family in soybean: Genome-wide ...

of EIL3, but not other EIL genes of Arabidopsis, ... and dicots than in other higher plants, and no EIL ... expression of GmEIL11 was down-regulated both in.

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SavvyCNV: genome-wide CNV calling from off-target reads | bioRxiv

13 Jun 2019 ... This article is a preprint and has not been certified by peer review [what does this ... Benchmarking off-target CNV calling from targeted panel data. ... Handsaker, R.E., Van Doren, V., Berman, J.R., Genovese, G., Kashin, S., ...

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Single nucleotide polymorphism-based genome-wide linkage ...

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Genome-wide discovery of somatic regulatory variants in diffuse ...

1 Oct 2018 ... The function of MEF2B mutation in DLBCL has not been definitively established and these putative inactivating mutations provides further ...

Analysis of the Amborella trichopoda Chloroplast Genome ...

It does not display any of the genes characteristic of chloroplast DNA of the gymnosperm Pinus ... Goremykin, V., K. I. Hirsch-Ernst, S. Wölfl, and F. H. Hellwig.

Genome sequence and analysis of the tuber crop potato | Nature

10 Jul 2011 ... In an alignment length of ∼1 Mb (99.4% coverage), no gross ... onto the potato genome using TBLASTN with an E-value cut-off of 1 × 10−5, ...

Genome-wide association of Yorkie with chromatin and chromatin ...

8 Feb 2013 ... Yki was pulled down by GST:GAF, but not by GST (Fig. ... Dalao), or Mediator subunits (Kto, MED23 or MED15) were downregulated by RNAi.

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Systems-wide Analysis of a Phosphatase Knock-down by ...

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Genome Browser User's Guide - UCSC Genome Browser

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Circular RNAs: Methodological challenges and perspectives in ...

11 Sep 2018 ... Not surprisingly, circular RNA dysregulation and participation in the ... as well as in bowel tissues, where it is down‐regulated in Hirschsprung ...

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Computational discovery of hidden breaks in 28S ribosomal RNAs ...

20 Dec 2019 ... RNA Integrity Numbers (RIN) rely on intact 28S rRNA and will be consistently ... The processing of the hidden break does not occur in model ...

Circular Intronic Long Noncoding RNAs - ScienceDirect

26 Sep 2013 ... This motif is not enriched in regular introns or other reported ... each ASO can efficiently knock down its targeted intronic sequence (Figure 4C), ...

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Circulating Plasma Micro RNAs in Patients with Major Depressive ...

30 Sep 2016 ... Tel: 40-730656429, Fax: 40-256220484, [email protected] ... The lists of up-regulated (cut-off=2) and down-regulated miRs were imported into the ... that do not directly address the etiopathogenic determinants of MDD.

Dysregulation of Circular RNAs in Myotonic Dystrophy Type 1 - MDPI

19 Apr 2019 ... [email protected] (M.C.); [email protected] ... of effective CELF1 knock-down (Figure S9a), no significant change of ...

Expression Levels of Long Non-Coding RNAs Change in ... - MDPI

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Genome Browser FAQ - UCSC Genome Browser

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